../../tmp/servers/virsirnadb/784176219
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi2045 | 1 | ctcctaagacatgaatggt | 19 | |
| L24917.1 | HRVPP Human rhinovirus type 16 polyprotein gene, complete CDS | 7055 | ................... | 7073 | 100 |
| FJ445158.1 | Human rhinovirus 81 isolate F06, complete genome | 7047 | ..t..g............. | 7065 | 89 |
| FJ445159.1 | Human rhinovirus 81 isolate F07, complete genome | 7047 | ..t..g............. | 7065 | 89 |
| FJ445157.1 | Human rhinovirus 81 strain ATCC VR-1191, complete genome | 7047 | ..tt.g............. | 7065 | 84 |
| D00239.1 | HRVACG Human rhinovirus 1B, complete genome | 7064 | ..at...ag.......... | 7082 | 78 |
| FJ445111.1 | Human rhinovirus 1 strain ATCC VR-1559, complete genome | 7068 | ..gt.g.a........... | 7086 | 78 |
| FJ445115.1 | Human rhinovirus 9 isolate F02, complete genome | 7057 | .....gttg.......... | 7075 | 78 |
| FJ445115.1 | Human rhinovirus 9 isolate F02, complete genome | 2462 | _____.........t..__ | 2473 | 57 |
| FJ445152.1 | Human rhinovirus 71 strain ATCC VR-1181, complete genome | 7088 | ...t.gc.c.......... | 7106 | 78 |
| FJ445152.1 | Human rhinovirus 71 strain ATCC VR-1181, complete genome | 3440 | ______.a........... | 3452 | 63 |
| FJ445152.1 | Human rhinovirus 71 strain ATCC VR-1181, complete genome | 1976 | _____..a.........__ | 1965 | 57 |
| FJ445154.1 | Human rhinovirus 77 strain ATCC VR-1187, complete genome | 5635 | _.........t..._____ | 5623 | 63 |
| FJ445154.1 | Human rhinovirus 77 strain ATCC VR-1187, complete genome | 7067 | _________.......... | 7076 | 52 |
| FJ445112.1 | Human rhinovirus 5 strain ATCC VR-485, complete genome | 1167 | ________........... | 1157 | 57 |
| FJ445124.1 | Human rhinovirus 26 strain ATCC VR-1136, complete genome | 1168 | ________........... | 1158 | 57 |
| FJ445168.1 | Human rhinovirus 91 strain ATCC VR-1292, complete genome | 1156 | ________........... | 1146 | 57 |
| M16248.1 | HRV89 Human rhinovirus type 89 (HRV89), complete genome | 7089 | ________........... | 7099 | 57 |
| FJ445184.1 | Human rhinovirus 89 strain ATCC VR-1199, complete genome | 7089 | ________........... | 7099 | 57 |
| NC_001617.1 | Human rhinovirus 89, complete genome | 7089 | ________........... | 7099 | 57 |
| FJ445164.1 | Human rhinovirus 86 strain ATCC VR-1196, complete genome | 5727 | __...cc.........___ | 5714 | 63 |
| DQ473492.1 | Human rhinovirus 73, complete genome | 2468 | _____.........t..__ | 2479 | 57 |
| DQ473498.1 | Human rhinovirus 10, complete genome | 5636 | _.........t..______ | 5625 | 57 |
| DQ473503.1 | Human rhinovirus 7, complete genome | 5137 | __.........a.._____ | 5148 | 57 |
| DQ473503.1 | Human rhinovirus 7, complete genome | 7084 | _________.......... | 7093 | 52 |
| DQ473509.1 | Human rhinovirus A, complete genome | 2461 | _____.........t..__ | 2472 | 57 |
| FJ445114.1 | Human rhinovirus 9 isolate F01, complete genome | 2463 | _____.........t..__ | 2474 | 57 |
| FJ445127.1 | Human rhinovirus 32 strain ATCC VR-1142, complete genome | 2460 | _____.........t..__ | 2471 | 57 |
| FJ445176.1 | Human rhinovirus 7 strain ATCC VR-1117, complete genome | 5137 | __.........a.._____ | 5148 | 57 |
| FJ445176.1 | Human rhinovirus 7 strain ATCC VR-1117, complete genome | 7084 | _________.......... | 7093 | 52 |
| FJ445177.1 | Human rhinovirus 9 strain ATCC VR-489, complete genome | 2461 | _____.........t..__ | 2472 | 57 |
| FJ445178.1 | Human rhinovirus 10 strain ATCC VR-1120, complete genome | 5636 | _.........t..______ | 5625 | 57 |
| AY751783.1 | Human rhinovirus 39, complete genome | 7065 | _________.......... | 7074 | 52 |
| DQ473507.1 | Human rhinovirus 53, complete genome | 7078 | _________.......... | 7087 | 52 |
| FJ445118.1 | Human rhinovirus 18 strain ATCC VR-1128, complete genome | 7050 | _________.......... | 7059 | 52 |
| FJ445121.1 | Human rhinovirus 21 strain ATCC VR-1131, complete genome | 7065 | _________.......... | 7074 | 52 |
| FJ445126.1 | Human rhinovirus 31 strain ATCC VR-506, complete genome | 7062 | _________.......... | 7071 | 52 |
| FJ445129.1 | Human rhinovirus 40 strain ATCC VR-341, complete genome | 5646 | _______..........__ | 5637 | 52 |
| FJ445133.1 | Human rhinovirus 47 strain ATCC VR-1157, complete genome | 7063 | _________.......... | 7072 | 52 |
| FJ445135.1 | Human rhinovirus 50 strain ATCC VR-517, complete genome | 7049 | _________.......... | 7058 | 52 |
| FJ445142.1 | Human rhinovirus 58 strain ATCC VR-1168, complete genome | 7078 | _________.......... | 7087 | 52 |
| FJ445148.1 | Human rhinovirus 66 strain ATCC VR-1176, complete genome | 7070 | _________.......... | 7079 | 52 |
| FJ445163.1 | Human rhinovirus 85 strain ATCC VR-1195, complete genome | 5648 | _______..........__ | 5639 | 52 |
| FJ445165.1 | Human rhinovirus 89 isolate F09, complete genome | 7088 | _________.......... | 7097 | 52 |
| FJ445166.1 | Human rhinovirus 89 isolate F08, complete genome | 7090 | _________.......... | 7099 | 52 |